Job Description P0ADG7 Confidence 97.25% Date Thu Jan 5 11:20:59 GMT 2012 Rank 240 Aligned Residues 141 % Identity 19% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	S	S	H	G	H	S	E	G	V	L	Q	R	I	R	E	T	R	.	.	.	A	K	Y	P	D	L	Q	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	T	L	Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	N	D	R	I	D	V	A	M	A	I	G	A	D	G	I	H	V	G	Q	D	D	M	P	I	P	M	I	R	K
Template Known Secondary structure		T												S	S										S	S	S		T	T																T	T							S									T		S						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
													275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	G	N	V	A	T	A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.	.																																														.	.
Template Conservation																																	.	.
Template Sequence		L	V	G	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L	S	K	M	G	P	D	M	V	D	Y	.	.	I	G	V	G	T	L	F	P	T	L	T	K	K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H	W	C	R	T	V	G	I	G	G	L	H	P
Template Known Secondary structure					T	T	S								S	T								T	T		T	T	S				.	.							S			S	S																					T	T		T	T							S	S			T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		342	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		R	F	S	G	D	I	A	.	.	.	.	.	K	A	I	A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I	C	V	V	S	D	I	I	A	S	L	D
Template Known Secondary structure		T	T									B		T	T	S			B		S					S	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions