 |
Job Description | P0ADG7 | Confidence | 79.95% | Date | Thu Jan 5 11:20:59 GMT 2012 |
Rank | 438 | Aligned Residues | 118 |
% Identity | 19% | Template | c3llvA_ |
PDB info |
PDB header:nad(p) binding protein | Chain: A: PDB Molecule:exopolyphosphatase-related protein; |
PDBTitle: the crystal structure of the nad(p)-binding domain of an2 exopolyphosphatase-related protein from archaeoglobus fulgidus to3 1.7a
|
Resolution | 1.70 Å |
|
 |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | A | G | A | G | N | E | E | R | V | D | A | L | V | A | A | G | V | D | V | L | L | I | D | S | S | H | G | H | S | E | G | V | L | Q | R | I | R | E | T | R | A | K | Y | P | D | L | Q | I | I | G | G | N | V | A | T | A | A | G | A | R | A | L | A | E | A | G | C | S | A | V | K | V | G | I | G | P | G | S |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   | . | . |
Template Sequence |   |
I | G | S | E | A | A | G | V | G | L | V | R | E | L | T | A | A | G | K | K | V | L | A | V | D | K | . |
. |
. |
. |
. |
. |
. |
S | K | E | K | I | E | L | L | E | D | E | G | F | D | . |
. |
A | V | I | A | D | P | T | D | E | S | F | Y | R | S | L | D | L | E | G | V | S | A | V | L | I | T | G | S | D | . |
. |
Template Known Secondary structure |   |
 |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T | T |
|  | . | . |  |  |  |
|
| T | T |
|  |  |  |  |  |  | S |
|
| T | T |
| S |  |  |  |  |
|
| S |
| . | . |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
  |
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | C | T | T | R | I | V | T | G | V | G | V | P | Q | I | T | A | V | A | D | A | V | E | A | L | E | G | T | G | I | P | V | I | A | D | G | G | I | R | F | S | G | D | I | A | K | A | I | A | A | G | A | S | A | V | M | V | G | S | M | L | A | G | T |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
| . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | F | N | L | K | I | L | K | A | L | R | S | V | S | D | V | Y | A | I | V | . |
. |
R | V | S | S | P | K | K | K | E | E | F | E | E | A | G | A | N | L | V | V | L | V | A | D | A | V | K | Q |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  | S |
| G | G | G |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|