Job Description P0ADG7 Confidence 98.37% Date Thu Jan 5 11:20:59 GMT 2012 Rank 189 Aligned Residues 163 % Identity 19% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		A	L	V	V	D	D	E	F	H	L	I	G	M	I	T	V	K	D	F	Q	K	A	E	R	K	P	N	A	C	K	D	E	Q	G	R	L	R	V	G	A	A	V	G	A	G	A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	S	S	H	G	H	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	T	L	H	S	P	I	E	H	V	V	I	A	X	S	H	E	K	I	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	Q	Q	Y	R	D	A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F
Template Known Secondary structure						S	S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T		S								T	T	S								T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
													254						.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.										.	.			.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.												.	.	.	.											.	.	.	.	.	.	.	.	.			.	.													.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.												.	.	.	.											.	.	.	.	.	.	.	.	.			.	.													.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	S	.	.	.	.	.	E	G	V	L	Q	R	I	R	E	T	R	.	.	.	.	A	K	Y	P	D	L	Q	I	I	G	.	.	.	.	.	.	.	.	.	G	N	.	.	V	A	T	A	A	G	A	R	A	L	A	E	.	.	.	.	.	A	G	C	S	A	V	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.												.	.	.	.											.	.	.	.	.	.	.	.	.			.	.													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.												.	.	.	.											.	.	.	.	.	.	.	.	.			.	.													.	.	.	.	.
Template Conservation
Template Sequence		S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A	T	P	E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I
Template Known Secondary structure		T					S	T	T	S	T	T																										T	T									S					T	T																				S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	S	G	D	I	A	K	A	I	A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E
Query Conservation
Alig confidence										.																																																	.
Template Conservation										.																																																	.
Template Sequence		A	S	W	G	R	H	I	Y	.	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	A	S	G	G	I	N	S	P	E	S	A	L	D	A	L	Q	H	A	.	D	X	V	G	X	S	S	P	F	V	T	E	P	D
Template Known Secondary structure				T	T			G	G	.	G		B				S	S	T	T	T	T	S	B										T	T	S	S						S	S			S								G	G	G		.	S					S	T						T	T
Template Predicted Secondary structure										.																																																	.
Template SS confidence
		265	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions