Job Description P0ADG7 Confidence 99.64% Date Thu Jan 5 11:20:59 GMT 2012 Rank 97 Aligned Residues 118 % Identity 38% Template c3kh5A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:protein mj1225; PDBTitle: crystal structure of protein mj1225 from methanocaldococcus2 jannaschii, a putative archaeal homolog of g-ampk. Resolution 2.10 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	K	H	E	S	G	V	V	T	D	P	Q	T	V	L	P	T	T	T	L	R	E	V	K	E	L	T	E	R	N	G	F	A	G	Y	P	V	V	T	.	E	E	N	E	L	V	G	I	I	T	G	R	D	V	R	F	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	V	M	K	I	A	Q	N	K	K	I	V	T	V	Y	P	T	T	T	I	R	K	A	L	M	T	M	N	E	N	K	Y	R	R	L	P	V	V	N	A	G	N	N	K	V	V	G	I	I	T	S	M	D	I	V	D	F	M	G	G	G	S	K	Y	N	L	I	R	E	K	H	E	R	N	F	L	A	A	I
Template Known Secondary structure			B	G	G	G	T	S			S					B		T	T	S	B																					T	T	T		B														T	T	T	S	G	G	G					T	T	S	T	T						T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	P	V	R	E	I	M	E	E	N	V	I	T	L	K	E	N	A	D	I	D	E	A	I	E	T	F	L	T	K	N	V	G	G	A	P	I	V	N	D	E	N	Q	L	I	S	L	I	T	E	R	D	V	I	R	A	L	L	D	K	I	D	E	N	E	V	I	D	D	Y	I	T	R	D	V	I	V	A	T
Template Known Secondary structure		T	S	B	G	G	G	T	S	B		S						T	T		B											T	T		S							T	T		B															G	G	G	S		T	T		B	S	G	G	G		B		S				B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																																																											144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	Q	P	V	S	V	Y	M	T	P	K	E	R	L	V	T	V	R	E	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																																					.	.
Template Sequence		P	G	E	R	L	K	D	V	A	R	T	M	V	R	N	G	F	R	R	L	P	V	V	S	E	G	R	L	V	G	I	I	T	S	T	D	F	I	K	L	L	G	S	D	W	A	F	N	H	M	Q	T	G	N	V	R	E	I	T	N	V	R	M	E	E	I	M	.	.	K	R	D	V	I	T	A	K	E	G	D
Template Known Secondary structure		T	T		B												T		S							T	T																T	S									S			T							B					S	.	.	B	S	S				B		T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	V	V	L	A	K	M	H	E	K	R	V	E	K	A	L	V	V	D	D	E	F	H	L	I	G	M	I	T	V	K	D	F	Q	K	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	K	K	I	A	E	I	M	V	T	N	D	I	G	A	L	P	V	V	D	E	N	L	R	I	K	G	I	I	T	E	K	D	V	L	K	Y	F
Template Known Secondary structure		B												T									T	T		B											G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions