Job Description P0ADG7 Confidence 72.19% Date Thu Jan 5 11:20:59 GMT 2012 Rank 478 Aligned Residues 141 % Identity 13% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	V	K	D	F	Q	K	A	E	R	K	P	N	A	C	K	D	E	Q	G	R	L	R	V	G	A	A	V	G	A	G	A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	S	S	H	G	H	S	E	G	V	L	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		S	T	L	R	E	G	E	Q	F	E	K	A	N	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T
Template Known Secondary structure					T	G	G	G	G	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T		S					.			G	G	G														S			S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.																	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.					.
Predicted Secondary structure																																																											.	.	.	.															.	.	.	.
Query SS confidence																																																											.	.	.	.															.	.	.	.
Query Sequence		G	N	V	A	T	A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	.	.	.	.	I	P	V	I	A	D	G	G	I	R	F	S	G	D	.	.	.	.	I
Query Conservation																																																											.	.	.	.															.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																.	.	.	.															.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		H	I	Q	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	.	.	.	.	.	.	.	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V
Template Known Secondary structure					S											T	T		S								S										.	.	.	.	.	.	.																T	T	S							S	S	T	T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	I	A	A	G	A	S	A	V	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	V	A	P	Y	V	D	R	V	G	L
Template Known Secondary structure						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions