Job Description P0ADG7 Confidence 71.11% Date Thu Jan 5 11:20:59 GMT 2012 Rank 486 Aligned Residues 119 % Identity 14% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.								.	.	.	.																																		.
Query SS confidence																			.	.								.	.	.	.																																		.
Query Sequence		G	A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	.	.	V	L	L	I	D	S	S	.	.	.	.	H	G	H	S	E	G	V	L	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G	G	N	V	A	T	A	A	G	.	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I
Query Conservation																			.	.								.	.	.	.																																		.
Alig confidence																			.	.								.	.	.	.																					.	.												.															.	.
Template Conservation																																																				.	.																											.	.
Template Sequence		G	E	S	F	L	E	L	L	K	E	Y	E	A	K	G	I	E	L	H	R	F	V	L	E	I	T	E	H	N	F	E	G	D	I	E	Q	L	Y	H	M	L	A	Y	Y	R	T	Y	G	I	K	.	.	I	A	V	D	N	I	G	K	E	S	S	N	L	D	R	I	A	L	L	S	P	D	L	L	K	I	.	.
Template Known Secondary structure		T														T			G	G	G							G	G	G			S														T	T	T			.	.							T	T	T	B												S					.	.
Template Predicted Secondary structure																																																				.	.																											.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	S	G	D	I	A	K	A	I	A	A	G	A	S	A	V	M
Query Conservation
Alig confidence		.	.	.	.	.	.									.	.	.																								.
Template Conservation		.	.	.	.	.	.									.	.	.																								.
Template Sequence		.	.	.	.	.	.	D	L	Q	A	L	S	P	S	.	.	.	Y	E	H	V	L	Y	S	I	S	L	L	A	R	K	I	G	A	A	L	L	Y	E	D	.	I	E	A	N	F	Q	L	Q	Y	A	W	R	N	G	G	R	Y	F	Q
Template Known Secondary structure		.	.	.	.	.	.			T	T					.	.	.																T								.			S										T	T
Template Predicted Secondary structure		.	.	.	.	.	.									.	.	.																								.
Template SS confidence
								175	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions