Job Description P0ADG7 Confidence 97.38% Date Thu Jan 5 11:20:59 GMT 2012 Rank 231 Aligned Residues 104 % Identity 20% Template c2nv2U_ PDB info PDB header:lyase/transferase Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis Resolution 2.12 Å

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		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																						.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																						.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G	G	.	N	V	A	T	A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	.	.	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.																						.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.								.																						.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		P	T	I	V	E	E	V	M	N	A	V	.	S	I	P	V	M	A	K	A	R	I	G	H	I	V	E	A	R	V	L	E	A	M	G	V	D	Y	I	D	E	S	E	V	L	T	P	A	D	E	E	F	H	L	N	K	N	E	Y	T	V	P	F	V	C	G	C	R	D	L	G	E	A	T	R	R	I	A	E	G
Template Known Secondary structure													.	S	S								T	T											T	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T	T
Template Predicted Secondary structure													.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
																																																				319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	S	G	D	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K	V	N	A	Q	V	R	K	V	V	A	M	S	E	D	E	L	M	T	E	A	K	N	L	G	A	P	Y	E	L	L	L	Q	I	K	K	D	G	K	L	P	V	V	N	F	A	A	G	G	V	A	T	P	A	D	A	A
Template Known Secondary structure			S								T	T	S			T																				S		G	G	G									T													T	S		S	S				B		S				S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	A	A	G	A	S	A	V	M	V	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	M	Q	L	G	A	D	G	V	F	V	G	S
Template Known Secondary structure						T	T		S						T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions