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Job DescriptionP0ADG7
Confidence99.92%DateThu Jan 5 11:20:59 GMT 2012
Rank28Aligned Residues255
% Identity26%Templatec2e77B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50... ......60.........70 .........80..
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Query Sequence  FDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVT. . . . . . EARLAIALAQEGGIGFI. . HKNMSIERQAEE
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Template Sequence  WKHKLLYP. RLAQDVEAPDTSTEIL. GHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEG
Template Known Secondary structure  GGG

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S



S
B

T.TSSS


S
GGGT
TTTS
TT
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   1058.1060..... ....1070.........1080. ........1090.........1100.........1110.........1120.........1130.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  VRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTV
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Template Sequence  LNGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PRWFQI
Template Known Secondary structure  TT
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   1136... 1140.....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  REGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGV
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Template Conservation 
   
       
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Template Sequence  YMAKDDQQNRDILD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EAKSDGA
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SS...........................................................T
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   1146...1150......... 1160......
 
   243...... 250.........260.........270.........280
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Query Sequence  DVLLIDS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SHGHSEGVLQRIRETRAKYPDLQIIGGNVAT
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Template Sequence  TAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHS. GLPVFVKGIQH
Template Known Secondary structure  S

S
SS



TT


SS

TTTGGGTTS
GGG

S
S


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S
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   1167..1170.........1180.........1190.........1200.........1210.........1220.........1230.... .....1240.....
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  AAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMV
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Template Sequence  PEDADMAIKRGASGIWVSNHGARQLYEAP. . . . . . GSFDTLPAIAERVNK. RVPIVFDSGVRRGEHVAKALASGADVVAL
Template Known Secondary structure  TT
S

GGGTSSSS

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STT
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   1246...1250.........1260.........1270.... .....1280......... 1290.........1300.........1310........
 
   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRS
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Template Sequence  GRPVL. . . . . . . . . . . . . . . . . . . . FGLAL. . . . . . . . . . . . . . . . . . . . . . . . GGWQG. . . . . . . AYSVLDYFQKDLTR
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   13191320... ..... .1330... ......1340.......
 
   441........450.....
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Query Sequence  CMGLTGCGTIDELRT
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Template Sequence  VMQLTGSQNVEDLKG
Template Known Secondary structure  T
SBTT
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   1348.1350.........1360..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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