Job Description P0ADG7 Confidence 99.45% Date Thu Jan 5 11:20:59 GMT 2012 Rank 115 Aligned Residues 169 % Identity 18% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270													.	.	.	.	.	.							.	.	.	280
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query Sequence		A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	S	S	H	G	H	.	.	.	.	.	.	.	.	.	S	E	G	V	L	Q	R	I	R	E	T	R	A	K	Y	P	D	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	I	I	G	G	.	.	.	.	.	.	N	V	A	T
Query Conservation																												.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Alig confidence															.													.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation															.
Template Sequence		D	D	L	K	Y	C	I	N	K	I	G	R	Y	.	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K
Template Known Secondary structure												G	G	G	.		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S
Template Predicted Secondary structure															.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.										.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	.	.	.	.	.	.	.	.	.	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	S	G	D	I	A	K	A	I
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.															.
Template Conservation																																																													.
Template Sequence		K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	.	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I
Template Known Secondary structure											T	T		S								B	S						G	G	G	T	T			S																						T	T	T	.		S						S	S			S
Template Predicted Secondary structure																																																													.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E	S	P	G	E	I	E	L	Y	Q	G	R	S	Y	K	S	Y	R	G	M	G	S	L	G	A	M	S	K	G	S	S	D	R	Y	F	Q	S	D	N	A	A	D	K	L	V	P	E	G	I	E	G	R	V	A	Y	K	G	R	L	K	E	I	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	G	M	.	.	K	S	A
Template Known Secondary structure			T	T							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	.	.	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530	.	.																																																										.	.	.	.			.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	Q	M	G	G	L	R	S	C	M	G	L	T	G	C	G	T	I	D	E	L	R	T	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y	N	L	K	E	A	I	G	R	K
Template Known Secondary structure																T		S	S	S	G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions