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Job DescriptionP0ADG7
Confidence99.05%DateThu Jan 5 11:20:59 GMT 2012
Rank143Aligned Residues136
% Identity26%Templatec1gthD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250... ......260.........270...... ...280. ........
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Query Sequence  AGNEERVDALVAAGVDVLLIDSSHGH. . . . . . . . . . . . . . SEGVLQRIRETRAKYPDLQIIGG. . . NVATA. AGARALAE
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Template Sequence  NDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV. QIPFFAKLTPNVTDIVSIARAAKE
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SSGGGGT
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   648.650.........660.........670.........680.........690.........700.. .......710.........720......
 
   290....... ..300.........310...... ...320.........330. ........340.........350.
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Query Sequence  AGCSAVKV. . . . GIGPGSICTTRIVTGVGVP. . . . . . . . . . . . . QITAVADAVEALEGT. GIPVIADGGIRFSGDIAKAI
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Template Sequence  GGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL
Template Known Secondary structure  T
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   727..730.........740.........750.........760.........770.........780.........790.........800......
 
   352.......360....
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Query Sequence  AAGASAVMVGSML
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Template Sequence  HSGASVLQVCSAV
Template Known Secondary structure  TT
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   807..810.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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