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Job DescriptionP0ADG7
Confidence98.95%DateThu Jan 5 11:20:59 GMT 2012
Rank155Aligned Residues142
% Identity13%Templatec1djnB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AGNEERVDALVAAGVDVLLIDSSHGHSEGVL. . . . . . . . . . . . . . . . . . . . . . . . QRIRETRAKYPDLQIIGGNVA. . . .
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Template Sequence  QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTV
Template Known Secondary structure  TT
S
TT

TTT



STTSSSTTTS
S
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  . . . . . . . . . . TAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAK
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Template Sequence  YGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIE
Template Known Secondary structure  S
TTS

TTTTTT
SS
STTGGGTS

TTT

TTTTTT
SS

S



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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   350.... .....360.........
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Query Sequence  AIAAG. ASAVMVGSMLAGTEE
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Template Sequence  IVTKGYADIIGCARPSIADPF
Template Known Secondary structure  TTS
SBS
TT
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   309310.........320.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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