Return to main results Retrieve Phyre Job Id

Job DescriptionP21513
Confidence98.05%DateThu Jan 5 11:38:24 GMT 2012
Rank10Aligned Residues77
% Identity19%Templated3bzka4
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  HEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKG
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Template Sequence  KDLKPGMVLEGVVTNVTN. . FGAFVDIGVHQDGLVHISALSEKFVK. . . . . . . . . DPYEVVKAGDIVKVKVMEVDIPRNR
Template Known Secondary structure  GG

TT
T..T
SSSS
GGGG
SS

S.........


TT
TTTT
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   650.........660....... ..670.........680.........690... ......700.........710........
 
   114.....120.
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Query Sequence  AALTTFIS
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Template Sequence  VGLSMRMS
Template Known Secondary structure  S
TT
Template Predicted Secondary structure 

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   719720......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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