Job Description P21513 Confidence 92.95% Date Thu Jan 5 11:38:24 GMT 2012 Rank 54 Aligned Residues 76 % Identity 22% Template d2ja9a1 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 2.20

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	.	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A
Query Conservation																															.
Alig confidence															.	.															.									.	.	.	.	.	.											.	.	.	.																				.
Template Conservation															.	.																								.	.	.	.	.	.											.	.	.	.																				.
Template Sequence		S	V	N	D	F	V	I	G	V	I	I	G	T	.	.	F	S	D	S	Y	K	V	S	L	Q	N	F	S	S	S	V	S	L	S	Y	M	A	F	.	.	.	.	.	.	P	N	A	S	K	K	N	R	P	T	.	.	.	.	L	Q	V	G	D	L	V	Y	A	R	V	C	T	A	E	K	E	L	E	.	A	E
Template Known Secondary structure			T	T											.	.		S	S						S	S	T	T	S							T	T	S	S	.	.	.	.	.	.	T	T			S	S	S				.	.	.	.			T	T												T	T	S		.
Template Predicted Secondary structure															.	.																								.	.	.	.	.	.											.	.	.	.																				.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.
		116	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	F	I	S	L	A	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	C	F	D	S	T	T	G	R
Template Known Secondary structure				S	S		T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions