Job Description P21513 Confidence 96.49% Date Thu Jan 5 11:38:24 GMT 2012 Rank 39 Aligned Residues 103 % Identity 12% Template c3h0gS_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		D	G	Q	R	L	Y	D	L	D	I	E	S	P	G	H	E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	.	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q
Query Conservation																																																												.
Alig confidence																																			.	.										.														.
Template Conservation																																			.	.										.
Template Sequence		Q	G	F	A	E	F	E	V	K	Y	R	A	V	L	W	R	P	F	R	G	E	V	V	D	A	I	V	T	T	V	N	K	M	.	.	G	F	F	A	N	I	G	P	L	.	N	V	F	V	S	S	H	L	V	P	P	D	M	K	F	D	P	T	A	N	P	P	N	Y	S	G	E	D	Q	V	I	E	K	G	S
Template Known Secondary structure		T																		T	T												T	T	.	.						B	T	T	B	.						G	G	G	S		T	T				B	S	S	S	S	S		B			S	S	S					S	S
Template Predicted Secondary structure																																			.	.										.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L	T	T	F	I	S	L	A	G	S	Y	L
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		N	V	R	L	K	I	V	G	T	R	T	D	A	T	E	I	F	A	I	A	.	.	T	M	K	E	D	Y	L
Template Known Secondary structure													S	S	S							.	.				S	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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