Return to main results Retrieve Phyre Job Id

Job DescriptionP21513
Confidence20.06%DateThu Jan 5 11:38:24 GMT 2012
Rank199Aligned Residues45
% Identity9%Templatec3fhcB_
PDB info PDB header:transport protein/hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with nup214
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   334.....340.........350.........360.........370.........380.
Predicted Secondary structure 

















Query SS confidence 















































Query Sequence  LRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISR
Query Conservation    

   
 
  


 
                   
           
Alig confidence 

































...










Template Conservation           



    
        
  
   
...    
 
  

Template Sequence  IDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML. . . PRNCQMLLFSA
Template Known Secondary structure 

GGG



TTSTTS...
TTSS
Template Predicted Secondary structure 









...




Template SS confidence 















































   231........240.........250.........260.... .....270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions