Job Description P21513 Confidence 98.10% Date Thu Jan 5 11:38:24 GMT 2012 Rank 8 Aligned Residues 88 % Identity 14% Template c2z0sA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable exosome complex rna-binding protein 1; PDBTitle: crystal structure of putative exosome complex rna-binding2 protein Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A
Query Conservation
Alig confidence																			.	.																														.	.	.	.	.																									.
Template Conservation																			.	.																														.	.	.	.	.																									.
Template Sequence		P	Q	A	G	D	V	V	I	G	L	I	Q	S	V	G	I	M	.	.	N	W	F	V	D	I	N	S	P	Y	V	A	V	L	S	V	Q	D	F	L	G	R	P	F	N	P	A	V	D	.	.	.	.	.	D	M	Q	S	L	L	K	V	G	D	Y	I	K	A	K	V	V	A	F	D	K	T	R	S	.	P	L
Template Known Secondary structure				T	T												S	S	.	.							S	S	S	S											T	S				T	T	T	T	.	.	.	.	.			T	T	S	S		T	T												T	T	S		.
Template Predicted Secondary structure																			.	.																														.	.	.	.	.																									.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.
		116	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		L	T	T	F	I	S	.	.	.	.	L	A	G	S	Y	L	V	L	M	P
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		L	T	V	Q	G	E	G	L	G	R	I	V	R	G	K	I	V	E	I	S
Template Known Secondary structure						S	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions