Job Description P21513 Confidence 42.14% Date Thu Jan 5 11:38:24 GMT 2012 Rank 129 Aligned Residues 77 % Identity 14% Template c2ytyA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fourth cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		S	P	G	H	E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	.	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R
Query Conservation																																.
Alig confidence																							.	.								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	G	R	N	S	N	S	K	R	L	L	G	Y	V	A	T	L	K	D	.	.	N	F	G	F	I	E	T	A	N	H	D	K	E	I	F	F	H	Y	S	E	F	S	G	D	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	L	G	D	M	V	E	Y	S	L	S	K	G	K	G
Template Known Secondary structure		S						S	S													S	.	.	S							S	S	S	S							T	T	T			S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T											S
Template Predicted Secondary structure																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	K	G	A	A	L	T	T	F	I	S	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	V	S	A	E	K	V	N	K	T	S	G	P
Template Known Secondary structure		S			B			S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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