Job Description P21513 Confidence 41.12% Date Thu Jan 5 11:38:24 GMT 2012 Rank 132 Aligned Residues 88 % Identity 17% Template c2xdpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c Resolution 1.56 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	.	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L	T
Query Conservation																												.
Alig confidence														.														.																				.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation														.																																		.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		T	R	Y	Y	S	C	R	V	M	A	V	T	.	S	Q	T	F	Y	E	V	M	F	D	D	G	S	F	S	R	D	T	F	P	E	D	I	V	S	R	D	C	L	K	L	G	P	.	.	.	.	.	.	.	.	.	.	P	A	E	G	E	V	V	Q	V	K	W	P	D	.	.	.	G	K	L	Y	G	A	K	Y
Template Known Secondary structure														.										T	T	S								G	G	G	B		S	S								.	.	.	.	.	.	.	.	.	.			T	T								T	T	.	.	.	S
Template Predicted Secondary structure														.																																		.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.		.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.											.	.	.	940	.	.	.	.	.	.	.	.	.				950	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	I	S	L	A	G	S	Y	L	V	L	M	P	N	N	P	R	A	G	G	I	S	R
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		F	G	S	N	I	A	H	M	Y	Q	V	E	F	E	D	G	S	Q	I	.	A	M	K	R
Template Known Secondary structure															T	T	S				.				G
Template Predicted Secondary structure																					.
Template SS confidence
		958	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.		.	.	.	980

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions