Job Description P21513 Confidence 37.77% Date Thu Jan 5 11:38:24 GMT 2012 Rank 140 Aligned Residues 84 % Identity 6% Template c2rf4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	.	.	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K
Query Conservation																																									.	.
Alig confidence																				.	.																				.	.
Template Conservation																				.	.
Template Sequence		Q	P	Q	V	G	D	V	L	E	G	Y	I	F	I	Q	S	A	S	.	.	H	I	G	L	L	I	H	D	A	F	N	A	S	I	K	K	N	N	I	P	V	D	W	T	F	V	H	N	D	G	N	S	L	G	H	W	V	D	S	N	G	E	P	I	D	G	K	L	R	F	T	V	R	N	V	H	T	T	G	R
Template Known Secondary structure					T	T												S	S	.	.							T	T	T							S	T	T	S		S	S		B					S								B		S	S			B			S													S	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		113	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	L	T	T	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	V	D	G	T	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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