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Job Description | P21513 | Confidence | 27.48% | Date | Thu Jan 5 11:38:24 GMT 2012 |
Rank | 174 | Aligned Residues | 89 |
% Identity | 17% | Template | c2qqsB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:jmjc domain-containing histone demethylation |
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
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Resolution | 2.82 Å |
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39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | N | I | Y | K | G | K | I | T | R | I | E | P | S | L | E | A | A | F | V | D | Y | G | A | E | R | H | G | F | . |
L | P | L | K | E | I | A | R | E | Y | F | P | A | N | Y | S | A | H | G | R | P | N | I | K | D | V | L | R | E | G | Q | E | V | I | V | Q | I | D | K | E | E | R | G | N | K | G | A | A | L | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | R | F | Y | Q | C | E | V | V | R | L | T | . |
T | E | T | F | Y | E | V | N | F | D | D | G | S | F | S | D | N | L | Y | P | E | D | I | V | S | Q | D | C | L | Q | F | G | P | . |
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T | D | G | Q | V | Y | G | A | K | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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912 | . | . | . | . | . | . | . | 920 | . | . | . | |
. | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | |
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. | . | . | 960 | . | . | . | . | . | . | . | |
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. | . | 970 | . | . | . | . | . | . | . |
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118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | F | I | S | L | A | G | S | Y | L | V | L | M | P | N | N | P | R | A | G | G | I | S | R | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | A | S | H | P | I | Q | M | Y | Q | V | E | F | E | D | G | S | Q | L | . |
V | V | K | R | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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978 | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | |
. | . | . | 1000 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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