Job Description P21513 Confidence 95.42% Date Thu Jan 5 11:38:24 GMT 2012 Rank 44 Aligned Residues 117 % Identity 16% Template c2pmzE_ PDB info PDB header:translation, transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	A	T	Q	Q	E	E	L	R	V	A	L	V	D	G	Q	R	L	Y	D	L	D	I	E	S	P	G	H	E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A
Query Conservation
Alig confidence																																															.	.											.
Template Conservation																																															.	.											.
Template Sequence		I	L	N	V	K	T	S	E	E	G	I	L	V	F	G	D	G	A	T	Y	H	E	V	E	F	D	M	I	T	Y	V	P	V	V	Q	E	V	V	E	G	E	V	L	Q	V	.	.	D	N	Y	G	I	F	V	N	L	G	.	P	M	D	G	L	V	H	I	S	Q	I	T	D	D	T	L	K	Y	D	N	V	R
Template Known Secondary structure												B			S	S			S																S	S											.	.		S	S							S	.	S	S						S	T	T	T		S	S					B	T	T	T
Template Predicted Secondary structure																																															.	.											.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		85	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		H	G	R	.	.	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L	T	T	F	I	S	L	A	G
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		G	I	I	F	G	E	K	S	K	K	V	I	Q	K	G	D	K	V	R	A	R	V	I	S	V	A	S	T	V	P	R	I	A	L	T	M	R	Q	P	Y	L	G
Template Known Secondary structure		T	B				S	S	S						T	T									B													S	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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