Job Description P21513 Confidence 86.17% Date Thu Jan 5 11:38:24 GMT 2012 Rank 65 Aligned Residues 78 % Identity 14% Template c2ja9A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:exosome complex exonuclease rrp40; PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40 Resolution 2.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A
Query Conservation
Alig confidence																.	.																		.	.	.	.	.	.	.	.	.																																.
Template Conservation																.	.																		.	.	.	.	.	.	.	.	.																																.
Template Sequence		P	S	V	N	D	F	V	I	G	V	I	I	G	T	.	.	F	S	D	S	Y	K	V	S	L	Q	N	F	S	S	S	V	S	.	.	.	.	.	.	.	.	.	L	S	Y	M	A	F	P	N	A	S	K	K	N	R	P	T	L	Q	V	G	D	L	V	Y	A	R	V	C	T	A	E	.	K	E	L	E	A	E
Template Known Secondary structure				T	T											.	.		S	S						S	S	T	T	S					.	.	.	.	.	.	.	.	.			T	T	S	S	T	T			S	S	S						T	T												.	T	T	S
Template Predicted Secondary structure																.	.																		.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.
		116	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	F	I	S	L	A	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	C	F	D	S	T	T	G	R
Template Known Secondary structure				S	S		T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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