Job Description P21513 Confidence 94.59% Date Thu Jan 5 11:38:24 GMT 2012 Rank 49 Aligned Residues 122 % Identity 13% Template c2ckzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase iii 25 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25. Resolution 3.2 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	I	N	A	T	Q	Q	E	E	L	R	V	A	L	V	D	G	Q	R	L	Y	D	L	D	I	E	S	P	G	H	E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		T	I	Y	D	L	L	T	V	E	E	G	Q	L	K	P	G	D	G	S	S	Y	I	N	V	T	F	R	A	V	V	F	K	P	F	L	G	E	I	V	T	G	W	I	S	K	C	T	.	.	A	E	G	I	K	V	S	L	L	G	I	F	D	D	I	F	I	P	Q	N	M	L	F	E	G	C	Y	Y	T	P	E
Template Known Secondary structure																S	S	S	S																	T	T												.	.	T	T							T	T	S								T	T	T	S		T	T					T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		84	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																							.
Query SS confidence					.	.	.																							.
Query Sequence		A	H	G	.	.	.	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	.	R	G	N	K	G	A	A	L	T	T	F	I	S	L	A	G	S	Y	L
Query Conservation					.	.	.																							.
Alig confidence					.	.	.																							.
Template Conservation
Template Sequence		E	S	A	W	I	W	P	M	D	T	K	L	Y	F	D	V	N	E	K	I	R	F	R	I	E	R	E	V	F	V	D	V	K	P	P	A	Y	A	L	L	G	S	C	Q	T	D	G	M
Template Known Secondary structure		T	T														T	T																			S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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