Job Description P21513 Confidence 97.51% Date Thu Jan 5 11:38:24 GMT 2012 Rank 27 Aligned Residues 86 % Identity 16% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	D	G	Q	R	L	Y	D	L	D	I	E	S	P	G	H	E	Q	K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	.	.	.	.	.	.	.	.	.	.	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R
Query Conservation																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																		.	.																																							.	.	.	.	.	.	.	.
Template Sequence		L	I	I	K	D	R	V	A	K	V	E	S	I	S	P	I	P	E	I	V	K	G	D	V	V	L	G	R	V	V	D	L	.	.	R	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	D	E	G	Y	V	K	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T							S	S							T	T											.	.		T	T										T	T		S	S			S	S								T	T	S	S	S	S	S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L	T	T	F
Query Conservation
Alig confidence		.																		.	.	.	.	.
Template Conservation		.																		.	.	.	.	.
Template Sequence		.	E	I	S	E	A	V	G	Y	L	D	I	L	K	A	R	V	I	.	.	.	.	.	G	D	N	L	R	L	S	T	K
Template Known Secondary structure		.	S	S	T	T	T			S	S									.	.	.	.	.	S	T	T	T
Template Predicted Secondary structure		.																		.	.	.	.	.
Template SS confidence
			107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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