Job Description P21513 Confidence 93.99% Date Thu Jan 5 11:38:24 GMT 2012 Rank 53 Aligned Residues 66 % Identity 23% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																		.	.										.	.	.
Query SS confidence																		.	.										.	.	.
Query Sequence		K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	.	.	L	E	A	A	F	V	D	Y	G	.	.	.	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N
Query Conservation																		.	.										.	.	.
Alig confidence																		.	.										.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	G	E	I	V	A	G	V	I	Q	R	D	S	R	A	N	A	R	G	L	V	V	V	R	I	G	T	E	T	K	A	S	E	G	V	I	P	A	A	E	Q	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	Y	E	H	G	N	R	L	R	C	Y	V	V	G	V	T	R	G	A
Template Known Secondary structure			T	T																T	T								S	S	S	S								G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T														S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		112	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	A	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	P	L	I	T
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions