Job Description P21513 Confidence 97.41% Date Thu Jan 5 11:38:24 GMT 2012 Rank 30 Aligned Residues 63 % Identity 27% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	N	I	Y	K	G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L
Query Conservation
Alig confidence																	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	G	T	V	T	T	A	E	V	I	R	V	X	G	.	.	E	W	A	D	I	R	I	G	.	K	L	E	T	R	L	P	K	K	E	W	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V	K	T	T	K	G	P	K	I
Template Known Secondary structure		T	T	T	S											S	.	.	S							T	.	T							G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T														T	T
Template Predicted Secondary structure																	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.																.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		117
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		195

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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