Job Description P76501 Confidence 99.86% Date Thu Jan 5 12:23:38 GMT 2012 Rank 9 Aligned Residues 143 % Identity 20% Template c2jtyA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																			.	.	.																	.
Query SS confidence																										.	.	.																			.	.	.																	.
Query Sequence		A	M	A	G	S	K	P	V	D	L	I	L	R	V	L	V	D	A	P	P	P	C	S	I	.	.	.	K	G	S	Q	V	E	F	G	N	M	I	A	D	N	V	D	G	T	.	.	.	N	Y	R	Q	D	A	K	Y	T	L	N	C	T	N	S	L	.	A	N	D	L	R	M	Q	L	K	G	N	T	S	T	I
Query Conservation																										.	.	.																			.	.	.																	.
Alig confidence																										.	.	.																			.	.	.																	.
Template Conservation
Template Sequence		A	A	T	T	V	N	G	G	T	V	H	F	K	G	E	V	V	N	A	A	C	A	V	D	A	G	S	V	D	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	S	K	A	A	V	A	F	L	G	T	A	I	D	A
Template Known Secondary structure							S	S	S	S					S	S					S	S																		G	G	G		S	S						S													T	T	T		S										B	S	S	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		99	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																			.	.	.
Query SS confidence								.	.	.	.	.	.																																			.	.	.
Query Sequence		N	G	E	T	V	L	.	.	.	.	.	.	S	T	N	I	T	G	L	G	I	R	I	E	N	S	A	D	N	S	L	F	A	V	G	E	N	S	W	T	P	F	N	I	N	N	.	.	.	Q	P	Q	L	K	A	V	P	V	K	A	S	G	A	Q	L	A	A	G	E	F	N	A	S	L	T	M	V	V	D	Y
Query Conservation								.	.	.	.	.	.																																			.	.	.
Alig confidence								.	.	.	.	.	.																																			.	.	.												.	.
Template Conservation																																																														.	.
Template Sequence		G	H	T	N	V	L	A	L	Q	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	F	S	S	E	T	T	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	.	.	G	A	A	T	P	G	A	A	N	A	D	A	T	F	K	V	Q	Y
Template Known Secondary structure		G	G	T	T	S	B				S		T	T	T	S		S	S								T	T	S		B			B	T	S											S															.	.	S	S				S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		170
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions