 |
Job Description | P30866 | Confidence | 99.35% | Date | Thu Jan 5 11:46:42 GMT 2012 |
Rank | 150 | Aligned Residues | 94 |
% Identity | 19% | Template | d1i9ga_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| tRNA(1-methyladenosine) methyltransferase-like
|
Resolution | 1.98 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | L | P | Q | G | R | P | T | F | G | A | A | Q | N | V | S | . |
. |
. |
A | V | V | A | Y | D | L | S | A | H | M | L | D | V | V | A | Q | A | A | E | A | . |
. |
. |
R | Q | L | K | N | I | T | T | R | Q | G | Y | A | E | S | L | P | F | A | D | N | A | F | D | I | V | I | S | R | Y | S | A | H | H | W | H |
Query Conservation |   |
  |
|
|
|   |
|   |   |
|   |   |
|
|   |   |   |   | . | . | . |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   | . | . | . | . | . |   |
|   |
|
Template Sequence |   |
A | G | A | G | S | G | A | L | T | L | S | L | L | R | A | V | G | P | A | G | Q | V | I | S | Y | E | Q | R | A | D | H | A | E | H | A | R | R | N | V | S | G | C | Y | G | Q | P | P | D | N | W | R | L | V | V | S | D | L | A | D | S | E | L | P | D | G | S | V | D | R | A | V | . |
. |
. |
. |
. |
L | D | M | L |
Template Known Secondary structure |   |
 |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | T |  |  |  |  |
| S |
| G | G | G |
|
|
|
| T | T |
|  |  |  |  |  | . | . | . | . | . |  |  | S | S |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 180 |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | G | A | A | L | R | E | V | N | R | I | L | K | P | G | G | R | L | I | V | M | D | V | M |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |
|   |
Template Sequence |   |
A | P | W | E | V | L | D | A | V | S | R | L | L | V | A | G | G | V | L | M | V | Y | V | A | T |
Template Known Secondary structure |   |
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|