Job Description P30866 Confidence 99.52% Date Thu Jan 5 11:46:42 GMT 2012 Rank 93 Aligned Residues 124 % Identity 19% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.				.	70	.	.
Predicted Secondary structure																	.	.																											.	.	.	.															.												.	.	.
Query SS confidence																	.	.																											.	.	.	.															.												.	.	.
Query Sequence		G	L	P	Q	G	R	P	T	F	G	A	A	Q	N	V	.	.	S	A	V	V	A	Y	D	L	S	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	L	K	.	.	.	.	N	I	T	T	R	Q	G	Y	A	E	S	L	P	F	.	A	D	N	A	F	D	I	V	I	S	R	.	.	.	Y	S	A	H
Query Conservation																	.	.																											.	.	.	.															.												.	.	.
Alig confidence																	.	.																											.	.	.	.															.												.	.	.
Template Conservation
Template Sequence		G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G	L	S	N	V	V	F	V	I	A	A	A	E	S	L	P	F	E	L	K	N	I	A	D	S	I	S	I	L	F	P	W	G	T	L	L
Template Known Secondary structure		T		T	T	S											T	T								S		G	G	G	G								T	S		G	G	G	T			S	S								T	T	S			G	G	G	T	T									S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		73	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		H	W	.	.	H	D	V	G	A	A	L	R	E	V	N	R	I	L	K	P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V	R	D	I	W	L	Q	T	V	E	A	L	R	D	T	S	H	V	R	N	Y	A	S	G	E	W	L	T	L	I	N	E	A	N	L	I	V	D	N	L	I	T	D
Query Conservation				.	.
Alig confidence				.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	V	I	K	P	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	L	S	E	Q	Y	K	A	E	L	S	N	S	G	F	R	I	D	D	V	K	E	L
Template Known Secondary structure						T	T											T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S									T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions