Job Description P30866 Confidence 99.70% Date Thu Jan 5 11:46:42 GMT 2012 Rank 41 Aligned Residues 140 % Identity 19% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.	.																										.	.	.	.																				.	.	.	.
Query SS confidence																.	.																										.	.	.	.																				.	.	.	.
Query Sequence		G	L	P	Q	G	R	P	T	F	G	A	A	Q	N	.	.	V	S	A	V	V	A	Y	D	L	S	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	.	.	.	.	L	K	N	I	T	T	R	Q	G	Y	A	E	S	L	P	F	A	D	N	.	.	.	.	A	F	D	I	V	I	S	R	Y	S	A	H
Query Conservation																.	.																										.	.	.	.																				.	.	.	.
Alig confidence																.	.																										.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E	R	L	P	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G
Template Known Secondary structure		S		T	T												T	T								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T	T			S											S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	W	H	D	V	G	A	A	L	R	E	V	N	R	I	L	K	P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V	R	D	I	W	L	Q	T	V	E	A	L	R	D	T	S	H	V	R	N	Y	A	S	G	E	W	L	T	L	I	N	E	A	N	L	I	V	D	N	L	I	T	D
Query Conservation
Alig confidence																																			.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H	A	W	R	P	.	.	.	.	.	.	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S	A	D	E	W	L	A	P	R	Y	A	E	A	G	W	K	L	A	D	C	R	Y	L
Template Known Secondary structure				T	S	S	S									T													G	G	G	B	T	T	.	.	.	.	.	.	B		G	G	G	T	T																				T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions