Return to main results Retrieve Phyre Job Id

Job DescriptionP30866
Confidence98.31%DateThu Jan 5 11:46:42 GMT 2012
Rank255Aligned Residues72
% Identity14%Templatec3fuxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dimethyladenosine transferase; PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 





































Query SS confidence 










































































Query Sequence  GLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDV
Query Conservation 


 
  
  

     
 


 
  

  
                             
 
          
 
Alig confidence 





































...

































Template Conservation 
 
 
 

  
      
 




      
       ... 
  
  
              

 



 


 
Template Sequence  GPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGL. . . PVRLVFQDALLYPWEEVPQGSLLVANLPYHIATP
Template Known Secondary structure 

TTSTT


S
GGGTTTS...


S
GGGS
GGGS
TT

TTT
Template Predicted Secondary structure 












...




















Template SS confidence 










































































   54.....60.........70.........80.........90. ........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions