Job Description P30866 Confidence 89.45% Date Thu Jan 5 11:46:42 GMT 2012 Rank 330 Aligned Residues 116 % Identity 18% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure														.	.													.	.	.	.	.	.
Query SS confidence														.	.													.	.	.	.	.	.
Query Sequence		G	L	P	Q	G	R	P	T	F	G	A	A	.	.	Q	N	V	S	A	V	V	A	Y	D	L	S	.	.	.	.	.	.	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	L	K	N	I	T	T	R	Q	G	Y	A	E	S	L	P	F	A	D	N	A	F	D	I	V	I	S	R	Y	S	A	H	H	W
Query Conservation														.	.													.	.	.	.	.	.
Alig confidence														.	.													.	.	.	.	.	.		.	.	.	.	.	.	.																		.
Template Conservation																																			.	.	.	.	.	.	.																		.
Template Sequence		G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	.	.	.	.	.	.	.	M	N	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	.	D	I	H	R	L	E	P	V	K	C	D	T	L	L	C	D	I	G	E	S	S	S
Template Known Secondary structure		T		T	T									T	S	T	T												T	T					.	.	.	.	.	.	.					B	T	T	G	G	G						S		.		T	T	S	S						S											S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																		.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		H	D	V	G	A	A	L	R	E	V	N	R	I	.	.	.	.	.	.	.	L	K	P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V	R	D	I	W	L	Q	T	V	E	A	L	R	D	T	S	H	V	R	N	Y	A
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.													.
Template Conservation																																		.
Template Sequence		S	S	V	T	E	G	E	R	T	V	R	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	V	L	.	A	P	Y	M	P	D	V	L	E	K	L	E	L	L	Q	R	R	F	G	G	T	V	I	R	N	P	L
Template Known Secondary structure																						T	T			S							S	.		T	T	S																						T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions