Job Description P30866 Confidence 99.13% Date Thu Jan 5 11:46:42 GMT 2012 Rank 185 Aligned Residues 105 % Identity 18% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																			.																									.	.											.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																			.																									.	.											.	.	.	.																.	.	.	.	.	.	.
Query Sequence		S	G	L	P	Q	G	R	P	T	F	G	A	A	Q	N	V	S	.	A	V	V	A	Y	D	L	S	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	L	.	.	K	N	I	T	T	R	Q	G	Y	A	.	.	.	.	E	S	L	P	F	A	D	N	A	F	D	I	V	I	S	.	.	.	.	.	.	.
Query Conservation																			.																									.	.											.	.	.	.																.	.	.	.	.	.	.
Alig confidence																			.																									.	.											.	.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E
Template Known Secondary structure			T		T	T	T									T	T		S							S															T	T			G	G	G						S												T	T											S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
				68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	Y	S	A	H	H	W	H	D	V	G	A	A	L	R	E	V	N	R	I	L	K	P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D
Template Known Secondary structure		T	T		S	S	S				T												T														T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions