Job Description P30866 Confidence 95.30% Date Thu Jan 5 11:46:42 GMT 2012 Rank 293 Aligned Residues 139 % Identity 17% Template c3b5iB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl PDBTitle: crystal structure of indole-3-acetic acid methyltransferase Resolution 2.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	P	Q	G	R	P	T	F	G	A	A	Q	N	V	S	A	V	V	A	Y	D	L	S	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	L	K	N	I	T	T	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	C	S	S	G	A	N	T	V	H	I	I	D	.	.	.	.	.	.	.	.	.	.	.	.	F	I	V	K	H	I	S	K	R	F	D	A	A	G	I	D	P	P	E	F	T	A	F	F	S	D	L	P	S	N	D	F	N	T	L	F	Q	L	L	P	P	L	V	S	N	D	G	N	R	S	Y	F	V	A	G
Template Known Secondary structure		T			S	S	S								.	.	.	.	.	.	.	.	.	.	.	.													T	T														T	T	S									S			B							B		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																																							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	Y	A	E	S	L	P	F	A	D	N	A	F	D	I	V	I	S	R	Y	S	A	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	H	D	V	G	A	A	L	R	E	V	N	R	I	L	K
Query Conservation		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	G	S	F	Y	R	R	L	F	P	A	R	T	I	D	F	F	H	S	A	F	S	L	H	W	L	S	Q	V	P	E	S	V	T	D	R	R	S	A	A	Y	N	R	G	R	V	F	I	H	G	A	G	E	K	T	T	T	A	Y	K	R	Q	F	Q	A	D	L	A	E	F	L	R	A	R	A	A	E	V	K
Template Known Secondary structure				S		T	T	S			S		T	T									S		T	T	B		S	S			G	G	G	G		T	T	S	T	T			T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query Sequence		P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	W	L	Q	T	V	E	A	L	R	D	T	S	H	V	R	N	Y	A	S	G	E	W	L	T	L	I	N	E	A	N	.	L	I	V	D	N	L	I
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		R	G	G	A	M	F	L	V	C	L	G	R	T	S	V	D	P	T	D	Q	G	G	A	G	L	L	F	G	T	H	F	Q	D	A	W	D	D	L	V	R	E	G	L	V	A	A	E	K	R	D	G	F	N	I	P	V	Y	A	P	S	L	Q	D	F	K	E	V	V	D	A	N	G	S	F	A	I	D	K	L	V
Template Known Secondary structure																S	S	T	T										S	S							T	T	T	T	S	S	S	S	S						S	S					B																	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		147	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	K	L	P	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	K	G	G	S	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions