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Job Description | P30866 | Confidence | 98.72% | Date | Thu Jan 5 11:46:42 GMT 2012 |
Rank | 237 | Aligned Residues | 99 |
% Identity | 14% | Template | c2pssC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:spermidine synthase; |
PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form
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Resolution | 2.20 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | S | G | L | P | Q | G | R | P | T | F | G | A | A | Q | N | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | V | G | G | G | D | G | G | I | I | R | E | L | C | K | Y | K | S | V | E | N | I | D | I | C | E | I | D | E | T | V | I | E | V | S | K | I | Y | F | K | N | I | S | C | G | Y | E | D | K | R | V | N | V | F | I | E | D | A | S | K | F | L | E | N | V | T | N | T | Y | D | V | I | I | V | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
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74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
W | H | D | V | G | A | A | L | R | E | V | N | R | I | L | K | P | G | G | R | L | I | V | M | D | V | M | S | P | G | H | P | V | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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D | S | S | N | F | Y | E | K | I | Y | N | A | L | K | P | N | G | Y | C | V | A | Q | C | E | S | L | W | I | H | V | G | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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