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Job DescriptionP30866
Confidence99.43%DateThu Jan 5 11:46:42 GMT 2012
Rank125Aligned Residues118
% Identity22%Templatec2pjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GLPQGRPTFGAAQNV. . SAVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAH. . . . . HWH
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Template Sequence  GCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV. EGEVFASNVFS. . EVKGRFDXIISNPPFHDGMQTSLD
Template Known Secondary structure  T
TTS
TT
B
SBTT
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STTT..T

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Query Sequence  DVGAALREVNRILKPGGRL. IVMDVMSPGHPVRDIWLQTVEALRDTSHV
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Template Sequence  AAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRF
Template Known Secondary structure  GGGTTSSS


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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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