Job Description P30866 Confidence 98.88% Date Thu Jan 5 11:46:42 GMT 2012 Rank 224 Aligned Residues 100 % Identity 11% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	L	P	Q	G	R	P	T	F	G	A	A	Q	N	V	S	A	V	V	A	Y	D	L	S	A	H	M	L	D	V	V	A	Q	A	A	E	A	R	Q	L	K	N	I	T	T	R	Q	G	Y	A	E	S	.	L	P	F	A	D	N	A	F	D	I	V	I	S	R	Y	S	A	H	H	W	H	D	V	G	A	A	L
Query Conservation																																																						.
Alig confidence																																																						.														.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		D	G	F	D	L	E	L	A	H	Q	L	F	K	Y	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N	F	T	H	A	K	Q	L	L	D	L	D	I	K	K	Y	D	L	I	F	C	.	.	.	.	.	L	Q	E	P	D	I	H	R	I
Template Known Secondary structure		S	S										T	T	S	S								S						G	G	G	T	T	T	S	T	T						T		T	T					S	S	G	G	G	S											.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V	N	R	I	L	K	P	G	G	R	L	I	V	M	D	V	M	S	P	G	H	P	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	K	R	M	L	K	E	D	G	V	F	I	S	V	A	K	H	P	L	L	E	H	V	S
Template Known Secondary structure						T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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