|   |
66 | . | . | . | |
70 | . | . | . | . | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | E | D | . |
D | C | V | T | R | L | I | Q | . |
D | D | V | N | E | T | A | Y | N | Q | I | K | N | W | S | I | S | E | L | R | E | Y | V | L | S | D | E | T | S | V | D | D | I | A | F | T | R | K | G | L | T | S | E | V | V | A | A | V | A | K | I | C | S | N | A | D | L | I | Y | G | A | K | K | M | P | V |
Query Conservation |   |
  |   |
|   | . |
|   |
|
|
|
|
|   | . |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|
|
|
Template Sequence |   |
R | R | D | Q | F | D | M | I | D | R | F | I | A | D | Y | A | I | N | V | E | R | T | E | Q | A | M | R | L | E | A | V | E | I | A | R | M | L | V | D | I | H | V | S | R | E | E | I | I | A | I | T | T | A | I | T | P | A | K | A | V | E | V | M | A | Q | M | N | V | V | E | M | M | M | A | L | Q | K | M | R | A |
Template Known Secondary structure |   |
B | G | G | G |
|
|  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | K | A | N | T | T | I | G | I | P | G | T | F | S | A | R | L | Q | P | N | D | T | R | D | D | V | Q | S | I | A | A | Q | I | Y | E | G | L | S | F | G | V | G | D | A | V | I | G | V | N | P | V | T | D | D | V | E | N | L | S | R | V | L | D | T | I | Y | G | V | I | D | K | F | N | I | P | T | Q | G | C |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|   |
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
Template Sequence |   |
R | R | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | N | Q | C | H | V | T | N | L | K | D | N | P | V | Q | I | A | A | D | A | A | E | A | G | I | R | G | F | S | E | Q | E | T | T | V | G | I | A | R | Y | A | P | F | N | A | L | A | L | L | . |
. |
V | G | S | Q | C | G | R | P | G | V | L | T | Q | C | S |
Template Known Secondary structure |   |
B | S | S |
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S | S | G | G | G |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | S | T | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | |
|
|
|
|
|
|
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | |
|
. | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | A | H | V | T | T | Q | I | E | A | I | R | R | G | A | P | G | G | L | I | F | Q | S | I | C | G | S | E | K | G | L | K | . |
E | F | G | V | . |
. |
E | L | A | M | L | D | E | A | R | A | V | G | A | E | F | N | R | I | A | G | E | N | C | L | Y | F | E | T | G | Q | G | S | A | L | S | A | G | A | N | F |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|   | . |   |
|
|
| . | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|
Template Sequence |   |
V | E | E | A | T | E | L | E | L | G | . |
. |
M | R | G | L | T | S | Y | A | E | T | V | S | V | Y | G | T | E | A | V | F | T | D | G | D | D | T | P | W | S | K | A | F | L | A | S | A | Y | A | S | R | G | L | . |
. |
. |
. |
. |
. |
. |
. |
K | M | R | Y | T | S | G | T | G | S | E | A | L | M | G | Y | S | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | . | . |  | T | T | S |
| S |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . | . |  |  |  |  |  |
|
| T | T |  |  |  |  | T | T |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
204 | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | D | Q | V | T | M | E | A | R | N | Y | G | L | A | R | H |
Query Conservation |   |
|
|
|   |   |
|   |
|
|
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|
Template Sequence |   |
S | K | S | M | L | Y | L | E | S | R | C | I | F | I | T | K | G |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
  |