|   |
4 | . | . | . | . | . | 10 | . | . | . | |
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
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|
|
| . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
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|
| . |
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|
|
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|
| . |
. |
. |
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|
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|
|
| . |
|
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|
|
Query Sequence |   |
R | I | I | P | V | T | A | F | S | Q | . |
. |
. |
N | C | S | L | I | W | C | E | Q | T | R | L | A | A | L | V | D | P | G | G | D | . |
A | E | K | I | K | Q | E | V | D | D | S | G | L | . |
. |
. |
T | L | M | Q | I | L | L | T | H | G | H | L | D | H | V | G | A | A | A | E | L | A | Q | H | . |
Y | G | V | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . | . |
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   | . |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   | . |   |   |   |   |
Alig confidence |   |
|
|
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|
| . | . | . |
|
|
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| . | . |
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| . |
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| . | . | . |
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| . |
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|
Template Conservation |   |
|
|   |   |
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|   |   |
|
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|   |
|   |   |
|
|   |   |   |   |   | . | . |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | I | V | P | F | G | A | A | R | E | V | T | G | S | A | H | L | L | L | A | G | G | R | . |
. |
R | V | L | L | D | C | G | X | F | Q | G | K | E | E | A | R | N | H | A | P | F | G | F | D | P | K | E | V | D | A | V | L | L | T | H | A | H | L | D | H | V | G | R | L | P | K | L | F | R | E | G | Y | R | G | P |
Template Known Secondary structure |   |
 |  |  |  |
| S |
| S | S | S | S | S |
|
|  |  |  |  |  |  | T | T |  | . | . |  |  |  |  |  |  |
|
|
|
| G | G | G | T | T | T | T | T | S |
|
| S | S |
| G | G | G |
|
|  |  |  |
|
| S |
|
| S | T | T | T | T | T |  |  |  |  |  |  | T | T |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |
|
|  | . | . |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |
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|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
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|  |
Template SS confidence |   |
|
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
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|
|
|
| . | . | . | . | . | . |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
| . |
. |
. |
. |
. |
. |
|
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|
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| . |
. |
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|
|
Query Sequence |   |
V | F | G | P | E | K | E | D | E | F | W | L | Q | G | L | P | A | Q | S | R | M | F | G | L | E | E | C | Q | P | L | T | . |
. |
. |
. |
. |
. |
P | D | R | W | L | N | E | G | D | T | I | S | I | G | N | V | T | L | Q | V | L | H | C | P | G | H | T | P | G | H | V | V | F | F | D | . |
. |
D | R | A | K | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . | . | . | . | . |
|
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|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   | . |   |
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
V | Y | A | T | R | A | T | V | L | L | X | E | I | V | L | E | D | A | L | K | V | X | D | E | P | F | F | G | P | E | D | V | E | E | A | L | G | H | L | R | P | L | E | Y | G | E | W | L | R | L | G | A | L | S | L | A | F | G | Q | . |
A | G | H | L | P | G | S | A | F | V | V | A | Q | G | E | G | R | T | L | V |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| S | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |
|
| S | S |
|
|  |  | S | S | S |
|  |  |  |  |  |  | . |
|
| S | S | T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
148 | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
I | S | G | D | V |
Query Conservation |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
Template Sequence |   |
Y | S | G | D | L |
Template Known Secondary structure |   |
 |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
159 | 160 | . | . | . |
  |