Job Description P75849 Confidence 99.96% Date Thu Jan 5 12:14:59 GMT 2012 Rank 17 Aligned Residues 193 % Identity 15% Template c3spuB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase ndm-1; PDBTitle: apo ndm-1 crystal structure Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																												.	.	.												.
Query SS confidence																												.	.	.												.
Query Sequence		T	A	F	S	Q	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	.	.	.	A	E	K	I	K	Q	E	V	D	D	S	.	G	L	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	Y	G	V	P	V	F	G	P	E	K	E	D	E
Query Conservation																												.	.	.												.
Alig confidence																	.	.										.	.	.												.																											.
Template Conservation																	.	.																																																			.
Template Sequence		G	A	V	A	S	N	G	L	I	V	R	D	G	G	R	.	.	V	L	V	V	D	T	A	W	T	D	D	Q	T	A	Q	I	L	N	W	I	K	Q	E	I	N	L	P	V	A	L	A	V	V	T	H	A	H	Q	D	K	M	G	G	M	D	A	L	H	A	A	.	G	I	A	T	Y	A	N	A	L	S	N	Q
Template Known Secondary structure														T	T		.	.								S	S															T											S	S	S					T	T							T	.	T
Template Predicted Secondary structure																	.	.																																																			.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P	G	H	V	V	F	F	D	D	R	A	K	L	L	I	S	G	D	V	I	F	K	G	G	V	G	R	S	D	F	.
Query Conservation																																																																																	.
Alig confidence																						.	.	.	.	.	.																																																						.
Template Conservation																						.	.	.	.	.	.
Template Sequence		L	A	P	Q	E	G	M	V	A	A	Q	H	S	L	T	F	A	A	N	G	.	.	.	.	.	.	W	V	E	P	A	T	A	P	N	F	G	P	L	K	V	F	Y	P	G	P	G	H	T	S	D	N	I	T	V	G	I	D	G	T	D	I	A	F	G	G	C	L	I	K	D	S	K	A	K	S	L	G	N	L
Template Known Secondary structure			G	G	G	G	T					S					B		T	T	S	.	.	.	.	.	.	B	B		G	G	G	S	T	T		T	T								S	S	S	S	S	S							T	T	S	S					T	T	T				T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	G	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F	I	P	G	H	G	P	L	S	T	L	G	Y	E	R	L	H	N	P	F	L	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	A	D	T	E	H	Y	A	A	S	A	R	A	F	G	A	A	F	P	K	A	S	M	I	V	M	S	H	S	A	P	D	S	R	A	A	I	T	H	T	A	R	M	A	D	K
Template Known Secondary structure		T	T			T	T	T												S	T	T							T	T						T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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