Job Description P75849 Confidence 99.52% Date Thu Jan 5 12:14:59 GMT 2012 Rank 63 Aligned Residues 195 % Identity 14% Template c3md7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase-like; PDBTitle: crystal structure of a beta-lactamase-like protein bound to gmp from2 brucella melitensis Resolution 1.27 Å

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		1	.	.	.	.	.	.	.	.	10																						.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		M	N	Y	R	I	I	P	V	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	Q	N	C	S	L	I	W	C	.	.	.	.	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	A	E	K	I	K	Q	E	V	D	D	S	G	L	T	L	M	Q	I	L	L	T
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.	.
Template Conservation																																																													.	.
Template Sequence		L	R	F	T	L	L	G	C	G	S	S	P	G	V	P	R	I	N	G	D	W	G	K	C	D	P	K	N	P	K	N	R	R	R	R	A	S	L	L	V	E	R	Y	D	A	E	G	N	N	T	V	V	V	I	D	T	G	P	D	.	.	F	R	M	Q	M	I	D	S	G	V	H	M	L	D	A	A	V	Y	T
Template Known Secondary structure										B		T	T		B	S		T	T				T	T	S		T	T		G	G	G		B		B										T	T												T	T	.	.									T					S					S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																																	.	.	.	.
Query SS confidence																		.	.	.	.	.																																																	.	.	.	.
Query Sequence		H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	.	.	.	.	.	Y	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	.	.	.	.	G	N	V	T	L	Q	V
Query Conservation																		.	.	.	.	.																																																	.	.	.	.
Alig confidence																		.	.	.	.	.																																																	.	.	.	.
Template Conservation
Template Sequence		H	P	H	A	D	H	I	H	G	I	D	D	L	R	T	Y	V	V	D	N	G	R	L	M	D	V	Y	A	N	R	L	T	R	N	R	L	Y	D	T	F	G	Y	C	F	E	T	P	V	G	S	S	Y	P	P	I	L	S	M	H	D	I	A	P	E	T	P	F	S	I	E	G	A	G	G	A	I	R	F	E	P
Template Known Secondary structure									T	T	G	G	G	G								T	S																			G	G	G	T	S			T	T														T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	C	P	G	H	T	P	G	H	V	V	F	F	D	D	R	A	K	L	L	I	S	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	K	G	G	V	G	R	S	D	F	P	R	G	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F	I
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																	.	.																																															.	.	.	.
Template Sequence		F	S	Q	V	H	G	D	I	E	S	L	G	F	R	I	.	.	G	S	V	V	Y	C	T	D	V	S	A	F	P	E	Q	S	L	Q	Y	I	K	D	A	D	V	L	I	I	G	A	L	Q	Y	R	P	H	P	S	H	F	S	L	G	E	A	L	.	.	.	.	E	W	I	E	K	L	S	P	K	R	A	I	L
Template Known Secondary structure							T	T									.	.	T	T						S		S	B			G	G	G					T	T		S									S	S		B	T	T	B								.	.	.	.									S
Template Predicted Secondary structure																	.	.																																															.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	H	G	P	L	S	T	L	G	Y	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	M	H	V	P	L	D	Y	E	T	V	M	R
Template Known Secondary structure			S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions