Job Description P75849 Confidence 99.97% Date Thu Jan 5 12:14:59 GMT 2012 Rank 12 Aligned Residues 196 % Identity 22% Template c3lvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr6230 protein; PDBTitle: new refinement of the crystal structure of bjp-1, a subclass b32 metallo-beta-lactamase of bradyrhizobium japonicum Resolution 1.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.														.	.	.
Query SS confidence																																.	.														.	.	.
Query Sequence		I	I	P	V	T	A	F	S	Q	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	.	.	A	E	K	I	K	Q	E	V	D	D	S	G	L	.	.	.	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	Y	G	V	P	V	F	G	P
Query Conservation																																.	.														.	.	.
Alig confidence																					.	.										.	.														.	.	.
Template Conservation																					.	.
Template Sequence		I	Y	Y	V	G	T	D	G	I	A	V	Y	V	I	K	T	S	Q	G	.	.	L	I	L	M	D	T	A	M	P	Q	S	T	G	M	I	K	D	N	I	A	K	L	G	F	K	V	A	D	I	K	L	I	L	N	T	H	A	H	L	D	H	T	G	G	F	A	E	I	K	K	E	T	G	A	Q	L	V	A	G
Template Known Secondary structure								S	S	S								T	T		.	.									G	G	G											T	T			G	G	G							S			S					T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P	G	H	V	V	F	F	D	D	R	A	K	L	L	I	S	G	D	V	I	F	K	G	G	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	D	K	P	L	L	E	G	G	Y	Y	P	G	D	E	K	N	E	D	L	A	F	P	A	V	K	V	D	R	A	V	K	E	G	D	R	V	T	L	G	D	T	T	L	T	A	H	A	T	P	G	H	S	P	G	C	T	S	W	E	M	T	V	K	D	G	K	E	D	R	E	V	L	F	F	C	S	G	T
Template Known Secondary structure		G	G	G							T			T	T		T	T		G	G	G								S					T	T						T	T										S	S	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		R	S	D	F	P	R	.	.	.	.	.	.	.	G	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F	I	P	G	H	G	P	L	S	T	L	G	Y	E	R	L	H
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.											.										.
Template Conservation																									.										.
Template Sequence		V	A	L	N	R	L	V	G	Q	P	T	Y	A	G	I	V	D	D	Y	R	A	T	F	.	A	K	A	K	A	M	K	I	D	.	V	L	L	G	P	H	P	E	V	Y	G	M	Q	A	K	R	A	E
Template Known Secondary structure			T	T				S	S	S		S	S	T	T										.						S			S	.					S	S	G	G	G	T	T
Template Predicted Secondary structure																									.										.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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