Job Description P75849 Confidence 99.39% Date Thu Jan 5 12:14:59 GMT 2012 Rank 66 Aligned Residues 176 % Identity 15% Template c3g1pA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein phnp; PDBTitle: crystals structure of phnp from e.coli k-12 Resolution 1.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.																									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	Y	R	I	I	P	V	T	A	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	A	E	K	I	K	Q	E	V	D	D	S	G	L	T	L	M	Q	I	L	L	T	H
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.
Template Conservation																																																	.	.											.	.	.	.
Template Sequence		L	T	L	T	L	T	G	T	G	G	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	R	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	N	D	A	.	.	I	T	L	I	D	A	G	L	H	D	.	.	.	.	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H
Template Known Secondary structure										B		S	S		B	S		T	T			S										G	G	G		B		B	S							T	T		.	.									T	T	.	.	.	.							T	T	S	S						S
Template Predicted Secondary structure																																																	.	.											.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	Y	.	.	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P
Query Conservation																		.	.
Alig confidence																		.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	.	.	.	.	.	.	.	.	.	.	D	E	Q	G	C	D	D	L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	N	H	S	K	L
Template Known Secondary structure								G	G	G	T	T	T	T	T		S	S	S									.	.	.	.	.	.	.	.	.	.		S	S		S	T	T	T	T	T	S		T	T									T	T						T	T										S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.																				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	V	V	F	F	D	D	R	A	K	.	L	L	I	S	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	K	G	G	V	G	R	S	D	F	P	R	G	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F	I	P	G	H	G
Query Conservation													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																															.
Template Sequence		T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	.	A	L	N	Q	V	I	R	S	P	R	V	I	L	T	H	I	S
Template Known Secondary structure										S	S								S		S	S												T			S								B	S	S		S	S			S	S	S		B						.									S						S
Template Predicted Secondary structure																																																															.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions