Job Description P75849 Confidence 99.74% Date Thu Jan 5 12:14:59 GMT 2012 Rank 52 Aligned Residues 179 % Identity 18% Template c3bk2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:metal dependent hydrolase; PDBTitle: crystal structure analysis of the rnase j/ump complex Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	R	I	I	P	V	T	A	F	S	Q	.	.	.	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	A	E	K	I	K	.	.	.	.	.	.	.	.	.	.	.	Q	E	V	D	D	S	G	L	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E
Query Conservation														.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		H	V	E	I	I	P	L	G	G	X	G	E	I	G	K	N	I	T	V	F	R	F	R	D	E	.	.	I	F	V	L	D	G	G	L	A	F	P	E	E	G	X	P	G	V	D	L	L	I	P	R	V	D	Y	L	I	E	H	R	H	K	I	K	A	W	V	L	T	H	G	H	E	D	H	I	G	G	L	P	F
Template Known Secondary structure										S	B	S	B	S	S									T	T		.	.									B				T	T	S	T	T														T	G	G	G															T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		68	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure					.	.	.	.	.																																																				.
Query SS confidence					.	.	.	.	.																																																				.
Query Sequence		L	A	Q	.	.	.	.	.	H	Y	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	.	V	T	L	Q	V	L	H	C	P	G	H	T	P	G	H	V	V	F	F	D
Query Conservation					.	.	.	.	.																																																				.
Alig confidence					.	.	.	.	.																								.	.	.	.	.	.																							.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		L	L	P	X	I	F	G	K	E	S	P	V	P	I	Y	G	A	R	L	T	L	G	L	L	R	G	K	L	E	E	F	.	.	.	.	.	.	G	L	R	P	G	A	F	N	L	K	E	I	S	P	D	D	R	I	Q	V	G	R	Y	F	T	L	D	L	F	R	X	T	H	S	I	P	D	N	S	G	V	V	I
Template Known Secondary structure									S				S																			T	.	.	.	.	.	.	T			S	T	T	S							T	T						T	T	T											S	S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				142	.	.	.	.	.	.	.	150	.																													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	R	A	K	L	L	I	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	F	K	G	G	V	G	R	S	D	F	P	R	G	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F
Query Conservation		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	P	I	G	T	I	V	H	T	G	D	F	K	L	D	P	T	P	I	D	G	K	V	S	H	L	A	K	V	A	Q	A	G	A	E	G	V	L	L	L	I	A	D	A	T	N	A	E	R	P	G	Y	T	P	S	E	X	E	I	A	K	E	L	D	R	V	I	G	R	A	P	G	R	V	F	V
Template Known Secondary structure				T	T								S					S	S		T	T	S																	S							T	T	T	T			S																				S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions