Job Description P75849 Confidence 99.61% Date Thu Jan 5 12:14:59 GMT 2012 Rank 55 Aligned Residues 149 % Identity 23% Template c2ycbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus Resolution 3.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure														.	.	.																				.	.	.	.	.																.	.	.
Query SS confidence														.	.	.																				.	.	.	.	.																.	.	.
Query Sequence		N	Y	R	I	I	P	V	T	A	F	S	Q	.	.	.	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	.	.	.	.	.	G	D	A	E	K	I	K	Q	E	V	D	D	S	G	L	.	.	.	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q
Query Conservation														.	.	.																				.	.	.	.	.																.	.	.
Alig confidence														.	.	.											.	.								.	.	.	.	.																.	.	.
Template Conservation																											.	.
Template Sequence		W	A	R	L	T	A	M	G	G	F	R	E	V	G	R	S	C	L	Y	L	Q	T	P	N	S	.	.	R	V	L	L	D	C	G	V	N	V	A	G	G	D	D	K	N	S	Y	P	Y	L	N	V	P	E	F	T	L	D	S	L	D	A	V	I	I	T	H	A	H	L	D	H	S	G	F	L	P	Y	L	Y	H
Template Known Secondary structure										S	S	S	S	S	S									S	S		.	.											S	S							S			T	T	S	T	T			T	T	T							S	S	S	S					T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		71		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		H	.	Y	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	.	.	.	.	.	.	.	.	.	.	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P	G	H	V	V	F
Query Conservation			.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence			.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	Y	D	G	P	V	Y	C	T	A	P	T	R	D	L	M	T	L	L	Q	L	D	H	I	D	I	A	H	R	E	D	E	P	L	P	F	N	V	K	H	V	K	K	S	V	K	H	T	I	T	L	D	Y	G	E	V	T	D	I	A	P	D	I	R	L	T	L	H	N	A	G	H	I	L	G	S	A	M	A
Template Known Secondary structure		T	T			S																											T				S												T						T	T							T	T										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		140	.					.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		F	D	.	.	.	.	D	R	A	K	L	L	I	S	G	D	V
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		H	L	H	I	G	D	G	Q	H	N	M	V	Y	T	G	D	F
Template Known Secondary structure						T	T	T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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