Job Description P75849 Confidence 99.91% Date Thu Jan 5 12:14:59 GMT 2012 Rank 42 Aligned Residues 202 % Identity 16% Template c2r2dC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.																													.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	R	I	I	P	V	T	A	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		K	L	F	V	L	D	L	G	E	I	R	V	D	E	N	F	I	I	A	N	S	T	F	V	T	P	Q	K	P	T	V	S	S	R	L	I	D	I	P	V	S	A	Y	L	I	Q	C	T	D	A	.	.	T	V	L	Y	D	T	G	C	H	P	E	C	M	G	T	N	G	R	W	P	A	Q	S	Q	L	N	A	P
Template Known Secondary structure																			S	T	T	S	S				S	S	S	T	T																		T	T		.	.								S		T	T		S	S	T	T		S	S								S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
									37	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.
Predicted Secondary structure		.	.	.	.	.	.	.												.	.	.																																																				.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.												.	.	.																																																				.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	K	I	K	Q	E	V	D	D	S	G	L	.	.	.	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	Y	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	.	.	.	.	.	.	.	L
Query Conservation		.	.	.	.	.	.	.												.	.	.																																																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.												.	.	.																							.	.	.																											.	.	.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		Y	I	G	A	S	E	C	N	L	P	E	R	L	R	Q	L	G	L	S	P	D	D	I	S	T	V	V	L	S	H	L	H	N	D	H	A	G	C	V	E	Y	F	G	.	.	.	K	S	R	L	I	A	H	E	D	E	F	A	T	A	V	R	Y	F	A	T	G	D	H	S	S	P	Y	I	V	K	D	I	E	A
Template Known Secondary structure		B				T	T		S								T	T			G	G	G		S					S			S	T	T	T	S	T	T	G	G	G		S	.	.	.	S	S																			T			S	S	S	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																												.	.	.															.	.	.	.
Query SS confidence																																												.	.	.															.	.	.	.
Query Sequence		E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P	G	H	V	V	F	F	D	.	.	.	D	R	A	K	L	L	I	S	G	D	V	I	F	K	.	.	.	.	G	G	V	G	R	S	D	F	P	R	G	D	H	N	Q	L	I
Query Conservation																																												.	.	.															.	.	.	.
Alig confidence																																												.	.	.															.	.	.	.
Template Conservation
Template Sequence		W	L	A	T	P	R	N	W	D	L	V	G	R	D	E	R	E	R	E	L	A	P	G	V	N	L	L	N	F	G	T	G	H	A	S	G	M	L	G	L	A	V	R	L	E	K	Q	P	G	F	L	L	V	S	D	A	C	Y	T	A	T	N	Y	G	P	P	A	R	R	A	G	V	L	H	D	T	I	G	Y	D
Template Known Secondary structure			T	T	S									T	T								T	T								S	S	S	S	S	S									S	S	S								T	T	S							S	S	S					S	S		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		S	S	I	K	D	K	L	L	P	L	G	D	.	.	D	V	I	F	I	P	G	H	G	P	L	S	T	L	G	Y	E	R	L	H	N	P	F	L	Q
Query Conservation														.	.
Alig confidence					.									.	.
Template Conservation					.
Template Sequence		R	T	V	.	S	H	I	R	Q	Y	A	E	S	R	S	L	T	V	L	F	G	H	D	R	E	Q	F	A	S	L	I	K	S	T	D	G	F	Y	E
Template Known Secondary structure					.											T						S	S								S		B	T	T	T			B
Template Predicted Secondary structure					.
Template SS confidence
		239	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions