Return to main results Retrieve Phyre Job Id

Job DescriptionP75849
Confidence99.93%DateThu Jan 5 12:14:59 GMT 2012
Rank35Aligned Residues196
% Identity18%Templatec2fhxB_
PDB info PDB header:hydrolase, metal binding proteinChain: B: PDB Molecule:spm-1; PDBTitle: pseudomonas aeruginosa spm-1 metallo-beta-lactamase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40..... ....50.........60.........70.........80...
Predicted Secondary structure 













.....













Query SS confidence 




































. . . . .





































Query Sequence  TAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDS. . . . . GLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKED
Query Conservation       
 


        



 
     
   
   .....   
  

 

 
 

 

                   
Alig confidence 














..



















.....
























.











Template Conservation       
   
   
 .. 





         
           
  

 

 
 

 

   
  .    
       
Template Sequence  DFYSSNVLVAKMLDG. . TVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK. MGAETWSSDLTK
Template Known Secondary structure  TTTT
TTS..
S

SS

S


SSSTT.TT
Template Predicted Secondary structure 





..
















.



Template SS confidence 















































































   60.........70.... .....80.........90.........100.........110.........120.... .....130......
 
   84.....90..... ....100.........110.........120......... 130.........140.........
Predicted Secondary structure 


.............



















.











Query SS confidence 











. . . . . . . . . . . . .

































.



















Query Sequence  EFWLQGLPAQSR. . . . . . . . . . . . . MFGLEECQPLTPDRWLNEGDTISIGNVTLQVLHC. PGHTPGHVVFFDDRAKLLIS
Query Conservation              .............                                  . 


            



Alig confidence 











.............

































.



















Template Conservation                                                                               
  
Template Sequence  QLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFG
Template Known Secondary structure 
S





S
TTT
TT


SSSSTT

TTTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   150.........160.........170.........180.........190.........200.........210..
Predicted Secondary structure 





























Query SS confidence 






























































Query Sequence  GDVIFKGGVGRSDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEM
Query Conservation 

 
                    

   
  
     
 



  


  
   
 

    
Alig confidence 






...















.











.






















Template Conservation 

     ...              

.  
  
    

.



       
       
   
Template Sequence  GMIKPKE. . . LGYLGDANVKAWPDSA. RRLKKFDAKIVI. PGHGEWGGPEMVNKTIKVAEKAV
Template Known Secondary structure 



SS
...



TT

TTT.GGGGS

S.
SBS

BST
Template Predicted Secondary structure 






...







.




.






Template SS confidence 






























































   220...... ...230.........240.. .......250.... .....260.........270.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions