Job Description P75849 Confidence 99.94% Date Thu Jan 5 12:14:59 GMT 2012 Rank 31 Aligned Residues 175 % Identity 21% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.														.	.																									.	.
Query SS confidence																							.	.														.	.																									.	.
Query Sequence		N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	.	.	A	E	K	I	K	Q	E	V	D	D	S	G	L	.	.	T	L	M	Q	I	L	L	T	H	G	H	L	D	H	V	G	A	A	A	E	L	A	Q	H	.	.	Y	G	V	P	V	F	G	P	E	K	E	D	E	F	W	L
Query Conservation																							.	.														.	.																									.	.
Alig confidence												.	.										.	.														.	.																									.	.
Template Conservation												.	.
Template Sequence		N	A	Y	L	V	K	L	N	G	A	.	.	N	V	L	I	D	G	W	K	G	N	Y	A	K	E	F	I	D	A	L	S	K	I	V	D	P	K	E	I	T	H	I	I	V	N	H	T	E	P	D	H	S	G	S	L	P	A	T	L	K	T	I	G	H	D	V	E	I	I	A	S	N	F	G	K	R	L	L	E
Template Known Secondary structure									T	T		.	.									G	G	G										T	T	S		G	G	G							S								T	T										S
Template Predicted Secondary structure												.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		Q	G	L	P	A	Q	S	R	M	F	G	L	E	E	C	Q	P	L	T	P	D	R	W	L	N	E	G	D	T	I	S	I	G	N	V	T	L	Q	V	L	H	C	P	.	G	H	T	P	G	H	V	V	F	F	D	D	R	A	K	L	L	I	S	G	D	V	I	F	K	G	G	V	G	R	S	D	F	P	R	G
Query Conservation																																													.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																													.													.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	I	K	D	V	T	V	V	K	D	G	E	E	R	E	I	G	G	K	K	F	K	F	V	X	T	P	W	L	H	W	P	D	T	X	V	T	Y	L	D	.	.	G	I	L	F	S	C	D	V	G	G	G	Y	L	L	P	E	I	L	D	D	S	N
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.											T	T						T	T									T	T	S	S	S	T	T							T	.	.	T						T	T	T			S	S			S	S	S	B	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
		119	120														.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
																							167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	N	Q	L	I	S	S	I	K	D	K	L	L	P	L	G	D	D	V	I	F	I	P	G	H	G	P	L	S	T	L	G	Y	E	R	L	H	N	P	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.
Template Conservation																																.										.
Template Sequence		E	S	V	V	E	R	Y	L	P	H	V	T	K	Y	I	V	T	V	I	G	H	Y	K	N	Y	I	L	E	G	A	.	E	K	L	S	S	L	K	I	K	.	A	L	L	P	G	H	G	L	I	W	K	K	D	P	Q	R	L	L	N	H	Y
Template Known Secondary structure																					G	G	G									.				T	T	S			S	.					S	S	S		B	B	S	S
Template Predicted Secondary structure																																.										.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions