Job Description Q2A0K9 Confidence 99.46% Date Thu Jan 5 12:33:36 GMT 2012 Rank 20 Aligned Residues 179 % Identity 13% Template d2d5ra1 SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.																						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		T	F	L	F	H	D	Y	E	T	F	G	T	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	.	.	.	.	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																	.
Template Conservation																																																																												.
Template Sequence		N	Y	V	A	M	D	T	E	F	P	G	V	V	A	R	P	I	G	E	F	R	S	N	A	D	Y	Q	Y	Q	L	L	R	C	N	V	D	L	L	K	I	I	Q	L	G	L	T	F	M	N	E	Q	G	E	Y	P	P	G	T	S	T	W	Q	F	N	F	K	F	N	L	T	E	D	M	Y	.	A	Q	D	S	I
Template Known Secondary structure																			S			S	S														T	T													T	T	S				S	S								B				T	T	T	S			.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.
		65	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																										.	.
Query SS confidence				.	.	.																										.	.
Query Sequence		L	I	.	.	.	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F	A	A	R	I	H	S	L	.	.	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D
Query Conservation				.	.	.																										.	.
Alig confidence				.	.	.																										.	.														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	L	T	T	S	G	I	Q	F	K	K	H	E	E	E	G	I	E	T	Q	Y	F	A	E	L	L	M	T	S	G	V	V	L	C	E	G	V	K	W	L	S	F	H	S	.	G	Y	D	F	G	Y	L	I	K	I	L	T	N	S	N	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	D
Template Known Secondary structure								T											B											T	T	T	S	S	S	S	S	S						S	S		.													T	S				S	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																															.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180
		140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure														.	.																									.
Query SS confidence														.	.																									.
Query Sequence		V	M	R	A	C	Y	A	L	R	P	E	G	.	.	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	.	E	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P
Query Conservation														.	.																									.
Alig confidence														.	.																									.
Template Conservation
Template Sequence		F	F	E	I	L	R	L	F	F	P	V	I	Y	D	V	K	Y	L	M	K	S	C	K	N	L	K	G	G	L	Q	E	V	A	E	Q	L	E	L	E	R	I	G	P	Q	H	Q	A	G	S	D	S	L	L	T	G	M	A	F	F	K	M	R	E	M	F	F
Template Known Secondary structure											S									G	G	G		T	T			S	S									T					S	S	T	T	S																			T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions