Job Description Q2A0K9 Confidence 98.27% Date Thu Jan 5 12:33:36 GMT 2012 Rank 40 Aligned Residues 187 % Identity 18% Template d1noya_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.20

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																																																									.
Query SS confidence																				.	.	.	.	.																																																									.
Query Sequence		G	K	Q	Q	S	T	F	L	F	H	D	Y	E	T	F	G	T	H	.	.	.	.	.	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	.
Query Conservation																				.	.	.	.	.																																																									.
Alig confidence																				.	.	.	.	.													.	.								.	.	.																																	.
Template Conservation																																					.	.								.	.	.
Template Sequence		D	R	K	F	V	R	V	A	N	C	D	I	E	V	T	G	D	K	F	P	D	P	M	K	A	E	Y	E	I	D	A	I	T	H	Y	.	.	D	S	I	D	D	R	F	.	.	.	Y	V	F	D	L	L	N	S	M	Y	G	S	V	S	K	W	D	A	K	L	A	A	K	L	D	C	E	G	G	D	E	V	P
Template Known Secondary structure			G	G	G													S	S				T	T	T			S									.	.		T	T	T	T			.	.	.									S	S													S		G	G	G	T
Template Predicted Secondary structure																																					.	.								.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
														79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	N	E	A	A	F	A	A	R	I	H	S	L	F	T	V	.	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	I	L	D	R	V	I	Y	M	P	F	D	N	E	R	D	M	L	M	E	Y	I	N	L	W	E	Q	K	R	P	A	I	F	T	G	W	N	I	E	G	F	D	V	P	Y	I	M	N	R	V	K	M	I	L	G	E	R	S	M	K	R	F	S	P	I	G	R	V	K	S	K	L	L	Q	N	M	Y	G	S
Template Known Secondary structure						T	T							S																S			S					S	S	T	T	T	T																			G	G	G	S	T	T	S									G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
							129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	H	S	N	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	A	D
Query Conservation		.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	I	Y	S	I	D	G	V	S	I	L	D	Y	L	D	L	Y	K	K	F	A	F	T	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	S	F	S	L	E	S	V	A	Q	H	E	T	K	K	G	K	L	P	Y	D	G	P	I	N	K	L	R	E	T	N	H	Q	R	Y	I	S	Y	N	I	I	D
Template Known Secondary structure								T	T	S													T			.	.	.	.	.	.	.	.	.	.	.	.			S			S										S							S	S		G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280													.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L	F	D	Y	L	F	T	H	R	N
Query Conservation
Alig confidence													.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		V	E	S	V	Q	A	I	D	K	I	R	.	.	.	.	.	G	F	I	D	L	V	L	S	M	S	Y
Template Known Secondary structure													.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions